If you have the jobs stored in the SD card then you should be able to use it in the new controller without issues as long as the new controller is the same.
Have you checked the contents of this card? I could be wrong, but I'm not sure if the controller SD card saves Robot jobs. It will likely have the up to date CMOS.BIN saved in it if auto-back up has been set up.
Savings robot jobs usually requires manually backing them up.